STRINGSTRING
PP1S41_201V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S41_201V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S41_201V6.1Annotation not available (707 aa)    
Predicted Functional Partners:
PP1S41_172V6.1
Predicted protein (207 aa)
       
 
  0.957
PP1S9_248V6.1
Annotation not available (314 aa)
     
 
  0.943
PP1S236_47V6.1
Annotation not available (344 aa)
     
 
  0.935
PP1S351_7V6.1
Annotation not available (578 aa)
     
 
  0.797
PP1S77_196V6.1
Predicted protein (45 aa)
     
 
  0.797
PP1S77_195V6.1
Annotation not available (388 aa)
     
 
  0.797
PP1S77_167V6.1
Predicted protein (462 aa)
     
 
  0.797
PP1S42_140V6.1
Rad51B protein (342 aa)
     
 
  0.789
PP1S31_236V6.1
Rad51A protein (342 aa)
     
 
  0.789
PP1S129_197V6.1
Annotation not available (449 aa)
     
 
  0.738
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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