STRINGSTRING
PP1S41_50V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S41_50V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S41_50V6.1Predicted protein (355 aa)    
Predicted Functional Partners:
PP1S47_18V6.2
Predicted protein (579 aa)
     
 
  0.919
PP1S73_93V6.1
Predicted protein (515 aa)
   
  0.856
PP1S405_31V6.1
Predicted protein (515 aa)
   
  0.856
PP1S19_29V6.1
Predicted protein (296 aa)
   
 
  0.844
PP1S4979_1V6.1
Predicted protein (299 aa)
   
 
  0.827
PP1S72_148V6.1
Predicted protein (355 aa)
   
 
  0.775
PP1S1_661V6.1
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1Methylthioribulose-1-phosphate dehydrataseEnolase-phosphatase E1 (505 aa)
     
 
  0.772
PP1S41_319V6.1
Arginine decarboxylase (689 aa)
       
  0.745
PP1S14_213V6.1
Arginine decarboxylase (694 aa)
       
  0.745
PP1S7574_1V6.1
Predicted protein (272 aa)
       
  0.735
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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