STRINGSTRING
PP1S42_128V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S42_128V6.2" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S42_128V6.2Annotation not available (3896 aa)    
Predicted Functional Partners:
PP1S96_129V6.1
Annotation not available (2208 aa)
     
 
  0.938
PP1S67_180V6.1
Predicted protein (2230 aa)
     
 
  0.938
PP1S35_178V6.1
Predicted protein (2145 aa)
     
 
  0.938
PP1S356_43V6.1
Predicted protein (2218 aa)
     
 
  0.938
PP1S56_52V6.1
Predicted protein (155 aa)
       
  0.887
PP1S56_39V6.1
Predicted protein (155 aa)
       
  0.887
PP1S184_64V6.1
Predicted protein (156 aa)
       
  0.887
PP1S13_40V6.1
Predicted protein (155 aa)
       
  0.887
PP1S116_90V6.1
Annotation not available (1361 aa)
     
 
0.883
PP1S60_107V6.1
Predicted protein (665 aa)
     
  0.876
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (3%) [HD]