• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S42_165V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S42_165V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S42_165V6.1annotation not available (449 aa)    
Predicted Functional Partners:
PP1S332_29V6.1
annotation not available (227 aa)
     
 
  0.968
PP1S207_102V6.1
Predicted protein (210 aa)
     
 
  0.968
PP1S9_310V6.4
annotation not available (245 aa)
     
 
  0.965
PP1S173_12V6.3
Uncharacterized protein (333 aa)
     
 
  0.960
PP1S69_23V6.1
annotation not available (464 aa)
     
 
0.945
PP1S65_286V6.1
annotation not available (346 aa)
     
 
0.945
PP1S7_8V6.2
Uncharacterized protein (349 aa)
     
 
0.932
PP1S28_193V6.3
Uncharacterized protein (355 aa)
     
 
0.931
RS27
Arginine/serine-rich splicing factor RS27 transcript I (233 aa)
     
 
  0.902
PP1S183_39V6.1
annotation not available (370 aa)
     
 
0.878
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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