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STRINGSTRING
PP1S42_283V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S42_283V6.1" - Flagellar radial spoke protein 3 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S42_283V6.1Flagellar radial spoke protein 3 (422 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
     
 
  0.864
PP1S81_123V6.1
Predicted protein (1194 aa)
     
 
  0.864
PP1S62_17V6.1
annotation not available (797 aa)
       
      0.850
PP1S179_1V6.1
Predicted protein (342 aa)
       
      0.850
PP1S27_192V6.1
annotation not available (239 aa)
     
 
  0.844
PP1S12_264V6.1
Predicted protein (205 aa)
     
 
  0.844
PP1S277_88V6.1
PHD finger protein ING (260 aa)
       
      0.839
PP1S173_3V6.1
PHD finger protein ING (263 aa)
       
      0.839
PP1S7_232V6.1
Uncharacterized protein (269 aa)
       
      0.831
PP1S74_44V6.1
Predicted protein (280 aa)
       
      0.831
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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