• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S433_30V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S433_30V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S433_30V6.1annotation not available (1230 aa)    
Predicted Functional Partners:
PP1S72_227V6.1
Predicted protein (3779 aa)
     
   
  0.885
PP1S53_78V6.1
annotation not available (3804 aa)
     
   
  0.885
PP1S83_168V6.1
annotation not available (1275 aa)
     
      0.883
PP1S245_99V6.1
annotation not available (1391 aa)
     
      0.883
PP1S19_308V6.1
Predicted protein (291 aa)
     
        0.669
PP1S194_180V6.1
Predicted protein (1377 aa)
     
        0.669
PP1S15_286V6.2
Ubiquitin carboxyl-terminal hydrolase (342 aa)
     
   
  0.668
PP1S116_90V6.1
annotation not available (1361 aa)
     
 
  0.645
PP1S495_6V6.1
Ubiquitinyl hydrolase 1; Ubiquitin carboxyl-terminal hydrolase (817 aa)
     
   
  0.612
PP1S373_40V6.1
Predicted protein (284 aa)
     
   
  0.612
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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