STRINGSTRING
SGA1502 protein (Physcomitrella patens) - STRING interaction network
"SGA1502" - Histone chaperone in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGA1502Histone chaperone (239 aa)    
Predicted Functional Partners:
HIRA1502
Histone transcription regulator HIRA (1010 aa)
     
  0.981
HIRA1501
Histone transcription regulator HIRA (1007 aa)
     
  0.981
NFB1501
Chromatin assembly complex 1 subunit B/CAC2 (606 aa)
     
 
  0.969
PP1S35_109V6.1
Predicted protein (809 aa)
     
 
  0.964
PP1S28_266V6.1
DNA helicase (921 aa)
     
 
  0.964
PP1S206_32V6.1
Predicted protein (523 aa)
     
 
  0.962
PP1S260_29V6.1
Predicted protein (618 aa)
     
 
  0.959
PP1S204_5V6.1
Predicted protein (155 aa)
     
 
  0.959
PP1S206_25V6.1
Annotation not available (458 aa)
     
 
  0.956
NFC1501
Nucleosome remodeling factor, p48 subunit (422 aa)
     
 
  0.956
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (11%) [HD]