STRINGSTRING
PP1S438_24V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S438_24V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S438_24V6.1Predicted protein (2334 aa)    
Predicted Functional Partners:
PP1S84_129V6.1
Predicted protein (2124 aa)
     
  0.992
PP1S41_312V6.1
Annotation not available (1356 aa)
     
  0.992
PP1S440_11V6.1
Annotation not available (2385 aa)
     
  0.992
PP1S2_505V6.1
Annotation not available (133 aa)
     
  0.992
PP1S2_504V6.1
Annotation not available (272 aa)
     
  0.992
PP1S11_260V6.1
Predicted protein (1292 aa)
     
  0.992
PP1S28_172V6.1
Predicted protein (2180 aa)
     
  0.991
PP1S391_44V6.1
Predicted protein (1214 aa)
     
  0.990
PP1S197_41V6.1
Predicted protein (1214 aa)
     
  0.990
PP1S188_80V6.1
Predicted protein (1200 aa)
     
  0.990
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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