STRINGSTRING
PP1S44_154V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S44_154V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S44_154V6.1Annotation not available (374 aa)    
Predicted Functional Partners:
PP1S224_78V6.1
Predicted protein (546 aa)
     
   
  0.522
PP1S149_279V6.1
Annotation not available (259 aa)
     
   
  0.496
PP1S114_140V6.1
Annotation not available (502 aa)
     
   
  0.475
PP1S194_169V6.1
Annotation not available (367 aa)
           
  0.475
PP1S4_414V6.1
Predicted protein (380 aa)
           
  0.474
PP1S278_25V6.1
Predicted protein (425 aa)
           
  0.472
PP1S130_293V6.1
Predicted protein (435 aa)
           
  0.472
PP1S53_226V6.1
Predicted protein (378 aa)
           
  0.469
PP1S276_110V6.1
Predicted protein (373 aa)
           
  0.469
PP1S135_90V6.1
Annotation not available (298 aa)
           
  0.467
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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