• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S44_232V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S44_232V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S44_232V6.1annotation not available (2017 aa)    
Predicted Functional Partners:
PP1S68_3V6.1
Predicted protein (488 aa)
           
  0.616
PP1S94_163V6.2
Predicted protein (359 aa)
           
  0.610
PP1S29_118V6.1
annotation not available (764 aa)
           
  0.592
PP1S142_124V6.1
Predicted protein; Belongs to the CTL (choline transporter-like) family (781 aa)
           
  0.592
PP1S76_45V6.1
Predicted protein (232 aa)
           
  0.541
PP1S69_158V6.1
Predicted protein (161 aa)
           
  0.523
PP1S196_63V6.1
Predicted protein (157 aa)
           
  0.523
PP1S27_376V6.1
Predicted protein (68 aa)
           
  0.521
PP1S1_158V6.1
Uncharacterized protein (339 aa)
           
  0.521
PP1S12_233V6.1
Predicted protein (68 aa)
           
  0.521
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]