STRINGSTRING
PP1S44_46V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S44_46V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S44_46V6.1Annotation not available (546 aa)    
Predicted Functional Partners:
PP1S5177_1V6.1
Predicted protein (489 aa)
     
      0.898
ppabcg6
ATP-binding cassette transporter, subfamily G, member 6, group WBC protein PpABCG6 (675 aa)
   
 
  0.831
ppabcg23
ATP-binding cassette transporter, subfamily G, member 23, group PDR protein PpABCG23 (1397 aa)
   
 
  0.831
PP1S25_361V6.1
Predicted protein (476 aa)
         
  0.694
PP1S142_119V6.1
Annotation not available (445 aa)
         
  0.694
PP1S93_131V6.1
Predicted protein (2251 aa)
   
   
  0.573
PP1S81_196V6.1
Predicted protein (2214 aa)
   
   
  0.573
PP1S79_140V6.1
Predicted protein (2213 aa)
   
   
  0.573
PP1S58_117V6.1
Predicted protein (2210 aa)
   
   
  0.573
PP1S9_92V6.1
Annotation not available (566 aa)
   
 
  0.565
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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