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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
CHR1545 protein (Physcomitrella patens) - STRING interaction network
"CHR1545" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHR1545annotation not available (3255 aa)    
Predicted Functional Partners:
PP1S65_237V6.1
annotation not available (3914 aa)
     
 
  0.980
PP1S13_42V6.1
Predicted protein (176 aa)
       
 
  0.974
SWRCA1502
DNA methyltransferase 1-associated protein (485 aa)
     
 
  0.969
PP1S28_230V6.1
annotation not available (488 aa)
     
 
  0.969
PP1S54_136V6.1
annotation not available (1001 aa)
     
 
  0.960
PP1S48_69V6.1
Predicted protein (512 aa)
     
 
  0.958
PP1S9_14V6.1
annotation not available (53 aa)
     
 
  0.946
PP1S41_265V6.1
Predicted protein (65 aa)
     
 
  0.946
PP1S360_40V6.1
annotation not available (61 aa)
     
 
  0.946
PP1S62_87V6.1
annotation not available (446 aa)
     
 
  0.945
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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