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STRINGSTRING
PP1S457_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S457_13V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S457_13V6.1Predicted protein (270 aa)    
Predicted Functional Partners:
PP1S90_44V6.2
Predicted protein (339 aa)
   
   
  0.708
PP1S211_107V6.1
Predicted protein (356 aa)
   
   
  0.708
PP1S34_360V6.1
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (632 aa)
   
   
  0.677
PP1S263_35V6.1
Predicted protein (421 aa)
     
   
  0.649
PP1S223_31V6.1
Aspartate aminotransferase (418 aa)
       
 
  0.642
PP1S40_304V6.1
Predicted protein (393 aa)
   
   
  0.629
PP1S22_40V6.1
Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family (757 aa)
         
  0.601
PP1S60_178V6.1
Predicted protein (319 aa)
   
 
  0.590
PP1S54_102V6.1
Predicted protein (169 aa)
   
 
  0.590
PP1S209_135V6.1
Acyl-coenzyme A oxidase ; Belongs to the acyl-CoA oxidase family (667 aa)
   
 
  0.578
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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