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STRINGSTRING
PP1S45_269V6.3 protein (Physcomitrella patens) - STRING interaction network
"PP1S45_269V6.3" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S45_269V6.3Predicted protein (225 aa)    
Predicted Functional Partners:
PP1S462_9V6.1
annotation not available (1620 aa)
       
 
  0.999
PP1S324_18V6.1
Predicted protein (122 aa)
           
  0.999
PP1S257_1V6.1
Replication protein A subunit; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions. Probably involved in repair of double-strand DNA breaks (DSBs) induced by genotoxic stresses (479 aa)
     
 
  0.992
PP1S222_133V6.1
annotation not available (863 aa)
     
 
  0.992
PP1S192_40V6.1
annotation not available (885 aa)
     
 
  0.992
PP1S9_156V6.1
annotation not available (829 aa)
     
 
  0.992
PP1S172_96V6.1
DNA helicase; Belongs to the MCM family (901 aa)
     
 
  0.992
PP1S35_109V6.1
Predicted protein; Belongs to the MCM family (809 aa)
     
 
  0.990
PP1S28_266V6.1
DNA helicase; Belongs to the MCM family (921 aa)
     
 
  0.990
PP1S503_12V6.1
Predicted protein (226 aa)
     
 
  0.989
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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