STRINGSTRING
PP1S45_4V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S45_4V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S45_4V6.1Predicted protein (156 aa)    
Predicted Functional Partners:
PP1S8993_2V6.1
Annotation not available (77 aa)
              0.512
MSCL9
MscS-Like mechanosensitive ion channel MSCL9 (875 aa)
              0.512
MSCL16
MscS-Like mechanosensitive ion channel MSCL16 (1215 aa)
              0.512
MSCL2
MscS-Like mechanosensitive ion channel MSCL2 (542 aa)
              0.512
MSCL10
MscS-Like mechanosensitive ion channel MSCL10 (766 aa)
              0.512
MSCL15
MscS-Like mechanosensitive ion channel MSCL15 (1082 aa)
              0.512
MSCL7
MscS-Like mechanosensitive ion channel MSCL7 (570 aa)
              0.512
MSCL14
MscS-Like mechanosensitive ion channel MSCL14 (1014 aa)
              0.512
MSCL5
MscS-Like mechanosensitive ion channel MSCL5 (236 aa)
              0.512
MSCL4
MscS-Like mechanosensitive ion channel MSCL4 (448 aa)
              0.512
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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