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STRINGSTRING
PP1S465_28V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S465_28V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S465_28V6.1Predicted protein (454 aa)    
Predicted Functional Partners:
PP1S366_10V6.1
Predicted protein; Belongs to the cytochrome P450 family (508 aa)
     
 
  0.954
PP1S16_28V6.1
annotation not available (270 aa)
     
 
  0.951
PP1S2_737V6.1
Predicted protein; Belongs to the 3-beta-HSD family (460 aa)
     
  0.862
PP1S315_29V6.1
Predicted protein; Belongs to the cytochrome P450 family (536 aa)
     
 
  0.821
PP1S298_4V6.1
Predicted protein; Belongs to the cytochrome P450 family (517 aa)
     
 
  0.821
PP1S168_84V6.1
Predicted protein; Belongs to the cytochrome P450 family (542 aa)
     
 
  0.821
PP1S158_96V6.1
Predicted protein; Belongs to the cytochrome P450 family (536 aa)
     
 
  0.821
PP1S71_170V6.1
Predicted protein; 4-coumarate-coenzyme A ligase 3 (576 aa)
     
 
  0.802
PP1S20_346V6.1
Predicted protein; 4-coumarate-coenzyme A ligase 2 (669 aa)
     
 
  0.802
PP1S185_66V6.1
Predicted protein; 4-coumarate-coenzyme A ligase 1 (585 aa)
     
 
  0.802
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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