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STRINGSTRING
PP1S46_317V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S46_317V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S46_317V6.2Predicted protein (490 aa)    
Predicted Functional Partners:
PP1S207_37V6.1
Predicted protein (919 aa)
     
 
  0.995
PP1S54_78V6.2
Predicted protein (639 aa)
     
 
  0.991
PP1S9_29V6.1
annotation not available (674 aa)
     
 
  0.990
PP1S49_47V6.1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (674 aa)
     
 
  0.990
PP1S139_50V6.1
annotation not available (355 aa)
     
 
  0.990
PP1S18_81V6.1
annotation not available (920 aa)
     
 
  0.984
PP1S221_55V6.1
annotation not available (467 aa)
     
      0.982
PP1S151_6V6.1
Predicted protein (700 aa)
     
      0.982
PP1S42_20V6.1
annotation not available (936 aa)
     
 
  0.980
PP1S47_85V6.1
Predicted protein (595 aa)
     
 
  0.976
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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