STRINGSTRING
PP1S474_3V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S474_3V6.1" - DNA topoisomerase in Physcomitrella patens
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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PP1S474_3V6.1DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (869 aa)    
Predicted Functional Partners:
PP1S93_66V6.1
Annotation not available (890 aa)
   
  0.955
PP1S243_58V6.1
Predicted protein (1315 aa)
   
  0.955
PP1S232_56V6.1
Annotation not available (1230 aa)
   
  0.955
PP1S222_3V6.1
Annotation not available (857 aa)
   
  0.955
PP1S152_88V6.1
Predicted protein (1174 aa)
   
  0.955
PP1S128_34V6.1
Annotation not available (871 aa)
   
  0.955
PP1S80_151V6.1
DNA-directed RNA polymerase alpha chain (525 aa)
   
 
  0.943
PP1S90_153V6.1
Predicted protein (469 aa)
     
 
  0.932
PP1S225_68V6.1
Predicted protein (992 aa)
   
  0.900
PP1S301_54V6.1
Predicted protein (589 aa)
   
   
  0.862
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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