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PP1S477_11V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S477_11V6.1" - Methionine aminopeptidase in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S477_11V6.1Methionine aminopeptidase (409 aa)    
Predicted Functional Partners:
rpl16
Ribosomal protein L16 (561 aa)
   
 
  0.936
PP1S169_50V6.1
Predicted protein (480 aa)
   
   
  0.901
PP1S80_151V6.1
DNA-directed RNA polymerase alpha chain (525 aa)
   
 
  0.900
PP1S386_21V6.1
Predicted protein (1428 aa)
   
   
  0.893
PP1S31_130V6.1
Annotation not available (497 aa)
     
 
  0.887
PP1S22_139V6.1
Predicted protein (458 aa)
     
 
  0.887
PP1S14_357V6.1
Predicted protein (385 aa)
     
 
  0.887
PP1S11533_1V6.1
Predicted protein (262 aa)
     
 
  0.887
PP1S74_243V6.1
Annotation not available (1053 aa)
   
 
  0.823
PP1S49_269V6.1
Predicted protein (260 aa)
   
 
  0.784
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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