STRINGSTRING
PP1S47_221V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S47_221V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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[Homology]
Score
PP1S47_221V6.1Predicted protein (208 aa)    
Predicted Functional Partners:
PP1S48_106V6.1
Predicted protein (290 aa)
 
        0.720
PP1S30_174V6.2
Predicted protein (304 aa)
 
        0.716
PP1S238_57V6.1
Predicted protein (411 aa)
   
        0.513
PP1S117_177V6.1
Predicted protein (1232 aa)
   
        0.513
PP1S105_190V6.1
Predicted protein (409 aa)
   
        0.513
PP1S101_99V6.1
Annotation not available (649 aa)
   
        0.513
PP1S237_11V6.1
Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (402 aa)
              0.512
PP1S47_124V6.1
Predicted protein (209 aa)
   
        0.510
PP1S246_2V6.1
Predicted protein (217 aa)
   
        0.510
PP1S118_154V6.1
Annotation not available (221 aa)
   
        0.508
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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