• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S47_221V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S47_221V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S47_221V6.1Predicted protein (208 aa)    
Predicted Functional Partners:
PP1S336_16V6.2
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family (597 aa)
   
   
  0.938
PP1S725_2V6.1
Alpha-mannosidase (633 aa)
      
        0.882
PP1S424_8V6.1
Predicted protein (200 aa)
      
        0.867
PP1S26_37V6.1
Predicted protein (179 aa)
      
        0.867
PP1S24_153V6.1
Predicted protein (384 aa)
      
        0.867
PP1S23_130V6.1
Predicted protein (335 aa)
      
        0.867
PP1S171_158V6.1
annotation not available (177 aa)
      
        0.867
PP1S167_154V6.2
Predicted protein (337 aa)
      
        0.867
PP1S196_77V6.1
Trehalase (605 aa)
      
        0.863
PP1S194_104V6.3
Trehalase (580 aa)
      
        0.863
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >