STRINGSTRING
PP1S47_222V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S47_222V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S47_222V6.1Predicted protein (303 aa)    
Predicted Functional Partners:
PP1S6_302V6.1
Predicted protein (485 aa)
   
  0.986
PP1S14_106V6.1
Annotation not available (681 aa)
   
 
  0.977
PP1S6_148V6.1
Predicted protein (313 aa)
     
 
  0.956
PP1S24_7V6.1
Predicted protein (2058 aa)
         
  0.911
PP1S40_52V6.1
Predicted protein (170 aa)
   
      0.867
PP1S32_331V6.1
Putative adaptor protein ClpS (155 aa)
   
      0.867
PP1S169_113V6.1
Predicted protein (306 aa)
   
   
0.849
PP1S256_50V6.1
Annotation not available (708 aa)
     
  0.837
PP1S93_33V6.1
Predicted protein (962 aa)
   
 
  0.836
PP1S81_95V6.1
Predicted protein (960 aa)
   
 
  0.836
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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