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STRINGSTRING
PP1S47_278V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S47_278V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S47_278V6.1Predicted protein (1075 aa)    
Predicted Functional Partners:
PP1S35_276V6.1
Predicted protein (749 aa)
     
 
  0.838
PP1S344_11V6.1
annotation not available (2091 aa)
     
   
  0.637
PP1S32_129V6.1
annotation not available (747 aa)
     
   
  0.637
PP1S311_15V6.1
Predicted protein (833 aa)
     
   
  0.637
PP1S59_232V6.1
Uncharacterized protein (644 aa)
     
 
  0.616
PP1S39_74V6.1
Predicted protein (634 aa)
     
 
  0.616
PP1S36_119V6.1
Predicted protein (641 aa)
     
 
  0.616
PP1S130_295V6.1
Predicted protein (847 aa)
     
   
  0.598
PP1S54_260V6.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (789 aa)
     
   
  0.587
PP1S144_100V6.1
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (791 aa)
     
   
  0.587
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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