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STRINGSTRING
ArfB22 protein (Physcomitrella patens) - STRING interaction network
"ArfB22" - Arf6/ArfB-family small GTPase in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ArfB22Arf6/ArfB-family small GTPase ; Belongs to the small GTPase superfamily. Arf family (192 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
   
 
  0.878
PP1S81_123V6.1
Predicted protein (1194 aa)
   
 
  0.878
PP1S62_215V6.1
annotation not available (1149 aa)
       
 
  0.822
PP1S51_64V6.1
annotation not available (277 aa)
     
 
  0.799
PP1S150_22V6.3
Predicted protein (482 aa)
     
 
  0.799
CPC1505
Structural maintenance of chromosomes protein; Condensin complex component SMC3 (1171 aa)
       
 
  0.709
PP1S9_69V6.1
annotation not available (1060 aa)
       
 
  0.707
PP1S460_13V6.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (143 aa)
     
 
  0.694
PP1S231_24V6.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (161 aa)
     
 
  0.685
PP1S115_132V6.1
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family (161 aa)
     
 
  0.685
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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