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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S47_35V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S47_35V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S47_35V6.1annotation not available (1301 aa)    
Predicted Functional Partners:
PP1S54_136V6.1
annotation not available (1001 aa)
     
 
  0.957
HMTA1501
Histone H3 methyltransferase complex, subunit CPS60/ASH2/BRE2 (638 aa)
     
 
  0.913
HMTA1502
annotation not available (338 aa)
     
 
  0.913
PP1S70_189V6.1
annotation not available (310 aa)
     
 
  0.904
SWDA1501
annotation not available (407 aa)
     
 
  0.904
PP1S143_120V6.1
annotation not available (154 aa)
     
 
  0.904
PP1S51_69V6.1
annotation not available (565 aa)
     
 
  0.864
SWDC1502
WD40 repeat protein, COMPASS complex protein (309 aa)
     
 
  0.864
SWDC1503
WD40 repeat protein, COMPASS complex protein (318 aa)
     
 
  0.864
SWDC1501
WD40 repeat protein, COMPASS complex protein (318 aa)
     
 
  0.864
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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