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STRINGSTRING
PP1S47_43V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S47_43V6.1" - annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S47_43V6.1annotation not available (1482 aa)    
Predicted Functional Partners:
PP1S22_254V6.1
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (844 aa)
     
 
  0.988
PP1S100_74V6.1
Predicted protein (225 aa)
     
 
  0.988
PP1S168_95V6.1
Putative tRNA (cytidine(32)/guanosine(34)-2’-O)-methyltransferase; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (295 aa)
     
 
  0.984
PP1S39_104V6.1
Predicted protein (744 aa)
           
  0.958
PP1S201_92V6.1
Predicted protein (527 aa)
     
   
  0.942
PP1S117_73V6.1
annotation not available (2297 aa)
     
 
  0.912
PP1S20_156V6.1
annotation not available (187 aa)
     
      0.886
PP1S19_57V6.1
annotation not available (478 aa)
     
      0.886
PP1S9_29V6.1
annotation not available (674 aa)
     
        0.885
PP1S93_182V6.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1046 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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