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STRINGSTRING
PP1S49_212V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S49_212V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S49_212V6.1Predicted protein (1164 aa)    
Predicted Functional Partners:
PP1S302_56V6.1
annotation not available (1177 aa)
           
  0.760
PP1S60_116V6.1
Predicted protein; Belongs to the glycosyl hydrolase 9 (cellulase E) family (539 aa)
     
        0.701
PP1S308_21V6.1
Endoglucanase (532 aa)
     
        0.701
PP1S145_53V6.1
annotation not available (842 aa)
           
  0.604
PP1S347_21V6.1
annotation not available (2174 aa)
           
  0.547
PP1S137_89V6.1
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (251 aa)
           
  0.518
PP1S82_99V6.1
Uncharacterized protein (186 aa)
           
  0.514
PP1S66_291V6.1
annotation not available (845 aa)
           
  0.514
PP1S62_204V6.1
annotation not available (161 aa)
           
  0.514
PP1S400_12V6.1
Predicted protein (161 aa)
           
  0.514
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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