• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S49_64V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S49_64V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S49_64V6.1Predicted protein (228 aa)    
Predicted Functional Partners:
PP1S1_785V6.1
annotation not available (279 aa)
     
 
  0.921
PP1S107_189V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (811 aa)
     
 
  0.921
PP1S462_12V6.1
Predicted protein (86 aa)
     
 
  0.859
PP1S70_150V6.1
annotation not available (84 aa)
     
 
  0.802
PP1S333_26V6.1
annotation not available (148 aa)
     
 
  0.802
PP1S21_364V6.1
annotation not available (216 aa)
     
 
  0.802
PP1S145_172V6.1
Predicted protein; Belongs to the EF-1-beta/EF-1-delta family (236 aa)
     
 
  0.802
PP1S54_148V6.1
Predicted protein (576 aa)
     
 
  0.786
PP1S276_2V6.1
Predicted protein (316 aa)
     
        0.731
PP1S259_87V6.1
Predicted protein (316 aa)
     
        0.731
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]