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STRINGSTRING
PP1S508_12V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S508_12V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S508_12V6.1annotation not available (85 aa)    
Predicted Functional Partners:
PP1S31_86V6.1
DNA helicase; Belongs to the MCM family (713 aa)
     
        0.866
PP1S274_72V6.1
Predicted protein (903 aa)
     
 
  0.843
PP1S166_43V6.1
Predicted protein (1280 aa)
     
 
  0.843
PP1S183_85V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
  0.829
PP1S163_27V6.1
Predicted protein; Belongs to the protein kinase superfamily (293 aa)
     
 
  0.829
PP1S9_156V6.1
annotation not available (829 aa)
     
        0.813
PP1S357_37V6.1
Predicted protein (775 aa)
     
   
  0.783
PP1S49_109V6.1
Predicted protein (599 aa)
     
   
  0.779
PP1S130_12V6.1
annotation not available (524 aa)
     
 
  0.751
PP1S66_170V6.1
Predicted protein (2006 aa)
     
 
  0.750
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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