STRINGSTRING
PP1S509_22V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S509_22V6.2" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S509_22V6.2Predicted protein (1030 aa)    
Predicted Functional Partners:
PP1S159_2V6.1
Annotation not available (464 aa)
     
 
  0.864
PP1S110_13V6.1
Predicted protein (457 aa)
     
 
  0.864
PP1S72_197V6.1
Predicted protein; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis (350 aa)
     
 
  0.806
PP1S54_12V6.1
Chloroplast Toc34-3 (350 aa)
     
 
  0.806
PP1S136_62V6.1
Predicted protein (1478 aa)
       
 
  0.751
PP1S136_59V6.1
Predicted protein (1141 aa)
       
 
  0.751
PP1S123_63V6.1
Annotation not available (1214 aa)
       
 
  0.751
PP1S123_61V6.1
Predicted protein (1488 aa)
       
 
  0.751
PP1S6_441V6.1
Predicted protein (296 aa)
     
 
  0.712
PP1S351_56V6.1
Predicted protein (853 aa)
       
      0.679
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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