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STRINGSTRING
PP1S50_49V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S50_49V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S50_49V6.1Predicted protein (381 aa)    
Predicted Functional Partners:
PP1S373_37V6.1
annotation not available (323 aa)
   
 
  0.992
PP1S83_6V6.1
Predicted protein (339 aa)
     
 
  0.967
PP1S312_10V6.1
Predicted protein (572 aa)
   
 
  0.917
PP1S111_8V6.1
Predicted protein (579 aa)
   
 
  0.917
PP1S90_160V6.1
Predicted protein; Belongs to the adaptor complexes medium subunit family (455 aa)
           
  0.885
PP1S199_2V6.1
Predicted protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family (653 aa)
   
 
  0.857
PP1S100_87V6.1
Predicted protein (371 aa)
   
 
  0.857
PP1S125_47V6.1
Predicted protein (451 aa)
           
  0.839
PP1S9_331V6.1
annotation not available (347 aa)
           
  0.837
PP1S83_66V6.1
Predicted protein (359 aa)
     
   
  0.822
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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