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STRINGSTRING
PP1S51_131V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S51_131V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S51_131V6.1Predicted protein (331 aa)    
Predicted Functional Partners:
PP1S149_129V6.1
Predicted protein (174 aa)
       
 
  0.665
PP1S80_95V6.1
annotation not available (133 aa)
       
 
  0.636
PP1S138_50V6.1
annotation not available (777 aa)
     
   
  0.574
PP1S168_35V6.1
Predicted protein; Belongs to the small Tim family (89 aa)
       
 
  0.571
PP1S1_59V6.1
Sulfhydryl oxidase (283 aa)
       
 
  0.556
PP1S172_75V6.1
Sulfhydryl oxidase (196 aa)
       
 
  0.556
PP1S29_309V6.1
Predicted protein (736 aa)
     
   
  0.540
PP1S9_158V6.1
annotation not available (90 aa)
     
   
  0.535
PP1S178_121V6.1
Predicted protein; Belongs to the small Tim family (90 aa)
     
   
  0.535
CHR1529
Chromatin-remodeling complex ATPase; SNF2 family DNA-dependent ATPase (1049 aa)
     
   
  0.530
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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