• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S51_186V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S51_186V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S51_186V6.1Predicted protein (236 aa)    
Predicted Functional Partners:
PP1S154_15V6.1
Radial spoke protein 11 (217 aa)
     
   
  0.774
PP1S173_97V6.1
Radial spoke protein 9 (349 aa)
     
   
  0.761
PP1S244_86V6.1
Predicted protein (824 aa)
     
 
  0.748
PP1S191_98V6.1
annotation not available (820 aa)
     
 
  0.748
NDPK6
NDPK6 nucleotide diphosphate kinase-like protein ; Belongs to the NDK family (183 aa)
     
   
  0.717
PP1S9_40V6.1
annotation not available (257 aa)
       
 
  0.627
PP1S49_40V6.1
Predicted protein (260 aa)
       
 
  0.627
PP1S52_148V6.1
Predicted protein (425 aa)
     
   
  0.597
PP1S42_283V6.1
Flagellar radial spoke protein 3 (422 aa)
     
   
  0.597
PP1S83_25V6.1
annotation not available (1294 aa)
     
 
  0.594
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]