STRINGSTRING
PP1S526_5V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S526_5V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S526_5V6.1Predicted protein (535 aa)    
Predicted Functional Partners:
PP1S79_69V6.1
Predicted protein (284 aa)
 
 
  0.997
PP1S43_232V6.1
Imidazole glycerol phosphate synthase subunit hisF (617 aa)
         
  0.802
PP1S7_178V6.1
Annotation not available (698 aa)
         
  0.696
PP1S196_105V6.1
Annotation not available (1014 aa)
         
  0.687
PP1S137_132V6.1
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1008 aa)
         
  0.687
PP1S39_120V6.1
Predicted protein (692 aa)
   
   
  0.661
PP1S158_40V6.1
Predicted protein (2275 aa)
   
      0.657
PP1S13_171V6.1
Predicted protein (2276 aa)
   
      0.657
ftsZ2-2
FtsZ2-2 plastid division protein (464 aa)
   
 
  0.619
ftsZ2-1
FtsZ2-1 plastid division protein (458 aa)
   
 
  0.619
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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