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PP1S532_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S532_6V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S532_6V6.1Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (348 aa)    
Predicted Functional Partners:
PP1S316_17V6.1
Predicted protein (243 aa)
       
 
  0.867
ppabcb10
ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 (681 aa)
       
 
  0.635
ppabcb9
ATP-binding cassette transporter, subfamily B, member 9, group ATM protein PpABCB9 (765 aa)
       
 
  0.635
PP1S209_119V6.1
annotation not available (745 aa)
       
 
  0.635
PP1S66_291V6.1
annotation not available (845 aa)
       
 
  0.595
PP1S283_85V6.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (994 aa)
       
 
  0.595
PP1S253_16V6.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (1026 aa)
       
 
  0.595
PP1S131_178V6.1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (898 aa)
       
 
  0.595
PP1S76_45V6.1
Predicted protein (232 aa)
       
 
  0.586
PP1S395_52V6.1
Predicted protein (297 aa)
       
 
  0.586
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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