STRINGSTRING
PP1S532_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S532_6V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S532_6V6.1Predicted protein (348 aa)    
Predicted Functional Partners:
ppabcb10
ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 (681 aa)
       
 
  0.627
ppabcb9
ATP-binding cassette transporter, subfamily B, member 9, group ATM protein PpABCB9 (765 aa)
       
 
  0.627
PP1S209_119V6.1
Annotation not available (745 aa)
       
 
  0.627
PP1S28_231V6.1
Predicted protein (609 aa)
 
 
        0.550
PP1S316_17V6.1
Predicted protein (243 aa)
       
 
  0.517
PP1S795_3V6.1
Predicted protein (512 aa)
       
 
  0.485
PP1S76_98V6.1
Annotation not available (406 aa)
       
 
  0.485
PP1S56_118V6.1
Predicted protein (296 aa)
       
 
  0.485
PP1S493_8V6.1
Predicted protein (470 aa)
       
 
  0.485
PP1S430_6V6.1
Predicted protein (451 aa)
       
 
  0.485
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (11%) [HD]