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STRINGSTRING
PP1S53_242V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S53_242V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S53_242V6.1Predicted protein (364 aa)    
Predicted Functional Partners:
PP1S137_96V6.3
Predicted protein (1399 aa)
   
   
  0.635
PP1S72_215V6.1
Gluconokinase; Belongs to the gluconokinase GntK/GntV family (227 aa)
         
  0.608
PP1S141_30V6.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (364 aa)
         
  0.594
PP1S83_72V6.1
Predicted protein (402 aa)
       
      0.571
PP1S286_12V6.1
Predicted protein (430 aa)
       
      0.571
PP1S12_371V6.2
Predicted protein (428 aa)
       
      0.571
PP1S73_48V6.1
Predicted protein (998 aa)
       
 
  0.566
PP1S13_388V6.1
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (639 aa)
   
   
  0.534
PP1S10965_1V6.1
Predicted protein (322 aa)
         
  0.529
PP1S64_89V6.1
annotation not available (232 aa)
         
  0.514
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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