STRINGSTRING
PP1S53_256V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S53_256V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S53_256V6.1Predicted protein (713 aa)    
Predicted Functional Partners:
GPB1
GPB1 heterotrimeric G protein beta subunit protein (379 aa)
       
      0.643
PhotB1
PHOTB1 phototropin B1 blue light photoreceptor (1133 aa)
       
 
  0.552
PHOTA3
PHOTA3 phototropin photoreceptor (1098 aa)
       
 
  0.552
PP1S59_175V6.1
PHOTA4 phototropin blue light photoreceptor (868 aa)
       
 
  0.552
PHOTB2
PHOTB2 phototropin B2 blue light photoreceptor (1171 aa)
       
 
  0.552
PhotA2
PHOTA2 phototropin A2 blue light photoreceptor (1095 aa)
       
 
  0.552
PHOTA1
PHOTA1 phototropin A1 blue light photoreceptor (1070 aa)
       
 
  0.552
PP1S17_314V6.1
Annotation not available (923 aa)
       
 
  0.525
PP1S87_50V6.1
Predicted protein (907 aa)
           
  0.447
PP1S38_178V6.1
Predicted protein (916 aa)
           
  0.447
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (8%) [HD]