STRINGSTRING
PP1S53_43V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S53_43V6.1" - Protein-L-isoaspartate O-methyltransferase in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S53_43V6.1Protein-L-isoaspartate O-methyltransferase (276 aa)    
Predicted Functional Partners:
PP1S85_84V6.1
Predicted protein (360 aa)
   
   
  0.691
PP1S425_16V6.2
Predicted protein (368 aa)
   
   
  0.691
PP1S83_55V6.1
Enolase (492 aa)
   
 
  0.626
PP1S76_97V6.1
Enolase (488 aa)
   
 
  0.626
PP1S37_237V6.1
Enolase (476 aa)
   
 
  0.626
PP1S1_527V6.1
Enolase (445 aa)
   
 
  0.626
PP1S1_526V6.1
Enolase (445 aa)
   
 
  0.626
PP1S133_85V6.1
Annotation not available (265 aa)
   
 
  0.626
PP1S19_64V6.1
Annotation not available (764 aa)
   
   
  0.574
PP1S312_21V6.1
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (251 aa)
   
   
  0.559
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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