• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S54_278V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S54_278V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S54_278V6.1Predicted protein (512 aa)    
Predicted Functional Partners:
PP1S245_2V6.1
Predicted protein (338 aa)
           
  0.682
PP1S44_78V6.1
annotation not available (724 aa)
           
  0.642
PP1S10_192V6.2
Predicted protein; Belongs to the AAA ATPase family (724 aa)
           
  0.642
PP1S143_175V6.1
Peptidyl-prolyl cis-trans isomerase (220 aa)
     
   
  0.611
PP1S189_18V6.1
Predicted protein (502 aa)
   
     
  0.563
PP1S24_39V6.1
Predicted protein (434 aa)
   
     
  0.562
PP1S9_115V6.1
annotation not available (694 aa)
           
  0.561
PP1S267_81V6.1
annotation not available (232 aa)
           
  0.561
PP1S178_66V6.1
Predicted protein; Belongs to the AAA ATPase family (696 aa)
           
  0.561
PP1S156_30V6.1
annotation not available (696 aa)
           
  0.561
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]