STRINGSTRING
PP1S55_116V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S55_116V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S55_116V6.1Predicted protein (214 aa)    
Predicted Functional Partners:
PP1S67_133V6.1
Predicted protein (231 aa)
   
   
  0.650
PP1S75_5V6.1
Predicted protein (242 aa)
   
   
  0.579
PP1S29_195V6.1
Predicted protein (240 aa)
   
   
  0.579
PP1S33_287V6.1
Predicted protein (554 aa)
         
  0.547
PP1S21_151V6.1
MurG transferase (440 aa)
         
  0.547
PP1S20_66V6.1
Predicted protein (557 aa)
         
  0.547
ftsZ1-1
FtsZ1-1 plastid division protein (444 aa)
   
   
  0.546
ftsZ1-3
FtsZ1-3 plastid division protein (413 aa)
   
   
  0.546
ftsZ2-2
FtsZ2-2 plastid division protein (464 aa)
   
   
  0.545
ftsZ2-1
FtsZ2-1 plastid division protein (458 aa)
   
   
  0.545
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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