STRINGSTRING
PP1S55_322V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S55_322V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S55_322V6.1Annotation not available (1048 aa)    
Predicted Functional Partners:
NFA1501
Nucleosome assembly protein family (393 aa)
     
 
  0.957
NFA1502
Nucleosome assembly protein family (367 aa)
     
 
  0.957
PP1S113_126V6.1
Annotation not available (387 aa)
     
 
  0.957
HTA1501
Histone H2A (145 aa)
       
      0.916
HTA1506
Histone H2A (144 aa)
       
      0.916
HTA1502
Histone H2A (145 aa)
       
      0.916
PP1S271_27V6.1
Predicted protein (1039 aa)
     
 
0.911
PP1S203_56V6.1
Predicted protein (1037 aa)
     
 
0.911
PP1S42_258V6.1
Predicted protein (397 aa)
     
      0.908
PP1S31_225V6.1
Predicted protein (1120 aa)
     
 
  0.875
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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