• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S55_70V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S55_70V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S55_70V6.1annotation not available (1549 aa)    
Predicted Functional Partners:
PP1S80_87V6.1
annotation not available (1915 aa)
     
 
  0.994
PP1S313_74V6.1
Predicted protein (418 aa)
       
 
  0.982
PP1S8_180V6.2
Predicted protein (1605 aa)
     
 
  0.970
PP1S10_364V6.1
Predicted protein (117 aa)
       
 
  0.934
PP1S70_191V6.1
Predicted protein (538 aa)
       
 
  0.925
PP1S1_380V6.1
Uncharacterized protein (559 aa)
       
 
  0.925
PP1S183_64V6.1
annotation not available (145 aa)
       
 
  0.925
PP1S160_86V6.1
Predicted protein (163 aa)
       
 
  0.925
PP1S133_112V6.1
annotation not available (527 aa)
       
 
  0.925
PP1S112_54V6.1
Predicted protein (172 aa)
       
 
  0.925
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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