STRINGSTRING
PP1S55_93V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S55_93V6.1" - Annotation not available in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S55_93V6.1Annotation not available (336 aa)    
Predicted Functional Partners:
ppabci12
ATP-binding cassette transporter, subfamily I, member 12, ABC component protein PpABCI12 (443 aa)
 
  0.986
PP1S80_151V6.1
DNA-directed RNA polymerase alpha chain (525 aa)
         
  0.713
PP1S274_69V6.1
Urease (837 aa)
         
  0.565
PP1S8753_1V6.1
Predicted protein (181 aa)
   
   
  0.564
PP1S74_183V6.1
Predicted protein (489 aa)
         
  0.527
PP1S101_185V6.1
Predicted protein (307 aa)
         
  0.522
PP1S27_246V6.1
tRNA pseudouridine synthase (367 aa)
   
        0.513
PP1S93_68V6.1
Predicted protein (422 aa)
              0.512
PP1S91_15V6.1
Predicted protein (211 aa)
              0.512
PP1S86_182V6.1
Pseudouridine synthase (353 aa)
              0.512
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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