STRINGSTRING
PP1S55_98V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S55_98V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S55_98V6.1Predicted protein (201 aa)    
Predicted Functional Partners:
PP1S169_113V6.1
Predicted protein (306 aa)
       
    0.903
PP1S114_124V6.1
Predicted protein (286 aa)
     
      0.541
PP1S433_10V6.2
Predicted protein (297 aa)
   
        0.539
PP1S167_21V6.2
Predicted protein (338 aa)
   
        0.539
PP1S84_187V6.1
Predicted protein (352 aa)
   
        0.525
PP1S7761_1V6.1
Predicted protein (117 aa)
   
        0.525
PP1S410_1V6.1
Predicted protein (335 aa)
   
   
  0.519
PP1S318_72V6.1
Predicted protein (375 aa)
   
   
  0.519
PP1S29_140V6.1
Predicted protein (299 aa)
   
   
  0.519
PP1S156_108V6.1
Annotation not available (387 aa)
   
   
  0.519
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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