STRINGSTRING
PP1S56_121V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S56_121V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S56_121V6.1Annotation not available (446 aa)    
Predicted Functional Partners:
PP1S177_52V6.1
Predicted protein (743 aa)
       
 
  0.946
PP1S169_153V6.1
Predicted protein (745 aa)
       
 
  0.946
PP1S144_158V6.1
Predicted protein (743 aa)
       
 
  0.946
PP1S9_292V6.1
Annotation not available (158 aa)
       
 
  0.922
PP1S7_342V6.1
Predicted protein (157 aa)
       
 
  0.922
PP1S395_41V6.1
Annotation not available (97 aa)
       
 
  0.647
PP1S395_40V6.1
Annotation not available (114 aa)
       
 
  0.647
PP1S31_336V6.1
Predicted protein (734 aa)
       
 
  0.647
PP1S311_38V6.1
Predicted protein (746 aa)
       
 
  0.647
PHY2
Phytochrome 2; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1130 aa)
           
  0.478
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (5%) [HD]