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STRINGSTRING
PP1S57_34V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S57_34V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S57_34V6.1Predicted protein (656 aa)    
Predicted Functional Partners:
PP1S55_148V6.1
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors; Belongs to the peptidase A22A family (477 aa)
     
 
  0.999
PP1S124_125V6.1
Predicted protein (136 aa)
     
 
  0.998
PP1S126_124V6.1
Predicted protein (255 aa)
     
 
  0.996
PP1S51_22V6.1
annotation not available (189 aa)
     
 
  0.962
PP1S28_215V6.1
Uncharacterized protein (475 aa)
           
  0.889
HCP1501
Sin3 complex component (158 aa)
       
      0.846
PP1S300_41V6.1
Predicted protein (670 aa)
       
      0.811
PP1S33_38V6.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (192 aa)
       
 
  0.695
PP1S254_31V6.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (193 aa)
       
 
  0.695
PP1S162_33V6.1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment (193 aa)
       
 
  0.695
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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