STRINGSTRING
PP1S58_95V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S58_95V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S58_95V6.1Annotation not available (172 aa)    
Predicted Functional Partners:
PP1S207_100V6.1
Predicted protein (434 aa)
       
 
  0.786
PP1S341_30V6.1
Predicted protein (658 aa)
     
  0.781
PP1S14_180V6.1
Predicted protein (398 aa)
     
  0.781
PP1S144_24V6.1
Annotation not available (395 aa)
     
  0.781
PP1S399_25V6.1
Annotation not available (333 aa)
     
  0.780
PP1S123_151V6.1
Predicted protein (500 aa)
     
  0.780
PP1S13_3V6.1
Predicted protein (334 aa)
     
  0.733
PP1S60_107V6.1
Predicted protein (665 aa)
     
 
  0.635
PP1S88_108V6.1
Predicted protein (232 aa)
       
 
  0.561
PP1S79_158V6.1
Predicted protein (149 aa)
       
 
  0.561
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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