STRINGSTRING
PP1S59_66V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S59_66V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S59_66V6.1Uncharacterized protein (867 aa)    
Predicted Functional Partners:
PP1S55_319V6.1
Predicted protein (336 aa)
       
  0.790
PP1S352_15V6.1
Predicted protein (328 aa)
       
  0.790
PP1S135_17V6.1
Predicted protein (700 aa)
     
0.772
PP1S81_234V6.1
Predicted protein (687 aa)
     
0.764
PP1S154_52V6.1
Predicted protein (700 aa)
     
0.764
PP1S264_64V6.1
Predicted protein (692 aa)
     
0.762
PP1S11_401V6.1
Predicted protein (698 aa)
     
0.762
PP1S54_196V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (237 aa)
         
  0.708
PP1S197_22V6.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (237 aa)
         
  0.708
PHY5a
Phytochrome 5a; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1155 aa)
     
 
  0.682
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (7%) [HD]