STRINGSTRING
PP1S5_15V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S5_15V6.1" - Lon protease homolog in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S5_15V6.1Lon protease homolog (804 aa)    
Predicted Functional Partners:
PP1S150_25V6.1
Predicted protein (158 aa)
       
      0.999
PP1S7_399V6.1
Predicted protein; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (93 aa)
       
      0.924
PP1S36_271V6.1
Predicted protein; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (91 aa)
       
      0.924
PP1S98_222V6.1
Predicted protein (701 aa)
   
 
  0.921
PP1S171_84V6.1
Predicted protein (723 aa)
   
 
  0.921
PP1S163_100V6.1
Predicted protein (695 aa)
   
 
  0.921
PP1S340_7V6.1
Predicted protein (422 aa)
     
 
  0.919
PP1S218_133V6.1
Predicted protein (426 aa)
     
 
  0.919
PP1S5_17V6.1
Annotation not available (205 aa)
 
          0.902
PP1S7_290V6.1
Annotation not available (167 aa)
       
      0.880
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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