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PP1S5_179V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S5_179V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S5_179V6.1Predicted protein; Belongs to the protein kinase superfamily (381 aa)    
Predicted Functional Partners:
PP1S475_12V6.1
Predicted protein (697 aa)
   
 
  0.517
PP1S186_65V6.1
Predicted protein (735 aa)
   
 
  0.517
PP1S15_17V6.1
annotation not available (639 aa)
   
 
  0.517
PP1S42_85V6.1
annotation not available (1025 aa)
       
 
  0.486
PP1S114_90V6.1
Predicted protein; Belongs to the universal ribosomal protein uS5 family (346 aa)
           
  0.477
PP1S45_169V6.1
Predicted protein; Belongs to the protein kinase superfamily (302 aa)
   
      0.463
PP1S7_256V6.1
annotation not available (364 aa)
   
      0.453
PP1S193_68V6.1
annotation not available (343 aa)
   
      0.453
cpk5
Cpk5 calcium-dependent protein kinase (524 aa)
   
      0.441
CPK13
Cpk13 calcium-dependent protein kinase (523 aa)
   
      0.441
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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