STRINGSTRING
PP1S5_346V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S5_346V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S5_346V6.1Predicted protein (108 aa)    
Predicted Functional Partners:
PP1S266_15V6.1
Tubulin gamma chain ; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (475 aa)
         
  0.739
TUBG1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly (475 aa)
         
  0.739
PP1S10_24V6.1
Delta tubulin (473 aa)
         
  0.739
PP1S6_275V6.1
Predicted protein (112 aa)
         
  0.716
PP1S61_117V6.1
Predicted protein (116 aa)
         
  0.716
PP1S52_104V6.1
Predicted protein (112 aa)
         
  0.716
PP1S335_29V6.1
Predicted protein (99 aa)
         
  0.716
PP1S187_22V6.1
Predicted protein (99 aa)
         
  0.716
RabE13
Rab8/RabE-family small GTPase (216 aa)
         
  0.589
RabE12
Rab8/RabE-family small GTPase (216 aa)
         
  0.589
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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